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美国加州大学罗明诚博士的学术报告

发布部门: 招生办    发布时间: 2010-4-13 14:41:24    阅读次数:2924

学术报告

报告人:美国加州大学戴维斯分校罗明诚博士

题目:Physical mapping towards sequencing wheat genomes

时间:2010422日上午9:00-11:00

地点:逸夫楼第二学术报告厅

举办单位:农学院小麦所

 

罗明诚博士是我校1979级学士、1982级硕士、1988级博士,1992年获博士学位,师从颜济教授。1993 -1998年在美国加州大学戴维斯分校做博士后。1999年以来,在美国加州大学戴维斯分校从事植物遗传、结构基因组和生物信息学等研究工作,其研究结果在Nature, PNAS, Genetics, The Plant Journal, TAG, MBE等杂志上发表。

 

附:罗明诚博士发表的重要论文

1.        Genome Sequencing and Analysis of the Model grass Brachypodium distachyon. Nature 463: 763-768 (2010).

2.        Genome sequence of a tropical fruit tree, Carica papaya, reveals fewer genes than Arabidopsis. Nature 452: 991-996 (2008).

3.        Genome comparisons reveal a dominant mechanism of chromosome number reduction in grasses and accelerated genome evolution in Triticeae. Proceedings of National Academy of Sciences (2009).

4.        Differentiation between homoeologous chromosomes 1A of wheat and 1Am of Triticum monococcum and its recognition by the wheat Ph1 locus. Proceedings of National Academy of Sciences 92: 6645-6649 (1995).

5.        The R1 resistance cluster contains three groups of independently evolving, Type I R1 homologues and shows substantial structural variation between haplotypes of Solanum demissum. The Plant Journal. 44: 37-51 (2005).

6.        A diagnostic DNA marker for domestication of tetraploid wheat provides evidence for gene flow from wild tetraploid wheat to Triticum aestivum. Mol. Biol. Evol. 23(7): 1386-1396 (2006). 

7.        Discovery and Mapping of Wheat Ph1 Suppressors. Genetics 174: 17-27 (2006).

8.        Deletion Polymorphism in Wheat Chromosome Regions With Contrasting Recombination Rates. Genetics 168: 1665-1675 (2004).

9.        Sequence polymorphism in polyploid wheat and their D-genome diploid ancestor. Genetics 167: 941-947 (2004).

10.   Recombination of chromosomes 3Am and 5Am of Triticum monococcum with homeologous chromosomes 3A and 5A of wheat: The distribution of recombination across chromosomes. Genetics 154: 1301-1308 (2000).

11.   Position effects of ribosomal RNA multigene loci on meiotic recombination in wheat. Genetics 149: 1105-1113 (1998).

12.   Restriction fragment length polymorphism and divergence in the genomic regions of high and low recombination in self-fertilizing and cross-fertilizing Aegilops species. Genetics 148: 423-434 (1998).

13.   Recognition of homeology by the wheat Ph1 locus. Genetics 143: 1195-1203 (1996).

14.   : Genetic map of diploid wheat, Triticum monococcum L., and its comparison with maps of Hordeum vulgare L. Genetics 143: 983-999 (1996).

15.   : Genetic analysis and physiology of a trait for enhanced K+/Na+ discrimination in wheat. New Phytologist 137: 109-116 (1997).

16.   High-throughput fingerprinting of bacterial artificial chromosomes using the snapshot labeling kit and sizing of restriction fragments by capillary electrophoresis. Genomics 82: 378-389 (2003).

17.    Feasibility of physical map construction from fingerprinted bacterial artificial chromosome libraries of polyploid plant species. BMC Genomics 11:122.

18.   A BAC-based physical map of Brachypodium distachyon and its comparative analysis with rice and wheat. BMC Genomics (2009), 10:496.

19.   A first generation BAC-based physical map of the rainbow trout genome. BMC Genomics (2009), 10:462. 

20.   A physical map of the papaya genome with integrated genetic map and genome sequence. BMC Genomics 2009, 10:371.

21.   A high-throughput strategy for screening of bacterial artificial chromosome libraries and anchoring of clones on a genetic map constructed with single nucleotide polymorphisms. BMC Genomics 10(1):28 (2009)

22.    Structural characterization of Brachypodium genome and its syntenic relationship with rice and wheat. Plant Mol. Biol. (2009).

23.   A high throughput web application for PCR and sequencing primer design. BMC Bioinformatics. 9: 253. (2008).

24.   Analysis of gene-derived SNP marker polymorphism in US wheat (Triticum aestivum L.) cultivars. Molecular Breeding. 23: 23-33. (2008)

25.   GenoProfiler: batch processing of high throughput capillary fingerprinting data. Bioinformatics 23:240-242 (2007).

26.   An Algorithm for Discrimination of Multiple-Fragment Peaks in Capillary Fingerprinting Chromatograms. BIOCOMP'08 2: 451-456 (2008).

27.   Microsatellite Discovery from BAC End Sequences and Genetic Mapping to Anchor the Soybean Physical and Genetic Maps. Genome 51: 294-302 (2008)

28.   Construction and characterization of two BAC libraries from Brachypodium distachyon, a new model for grass genomics. Genome 49: 1099-1108 (2006).

29.   Differentiation between wheat chromosomes 4B and 4D. Genome 38: 1139-1147 (1995).

30.   Characterizing the nuclear genome structure of Brachypodium distachyon using BAC end sequences. Functional and Integrative Genomics, 8:135-147 (2008)

31.   Saturation and comparative mapping of the genomic region harboring Hessian fly resistance gene H26 in wheat. Theor. Appl. Genet. 118:1589–1599 (2009).

32.   The structure of wild and domesticated emmer wheat populations, gene flow between them, and the site of emmer domestication. Theor. Appl. Genet. 114: 947-959 (2007)

33.   Comparative genetic maps reveal extreme crossover localization in the Aegilops speltoides chromosomes. Theor. Appl. Genet. 111: 1098-1106 (2005)

34.   Genomic organization of the complex α-gliadin gene loci in wheat. Theor. Appl. Genet. 109: 648-657 (2004).

35.   The Q locus of Iranian and European spelt wheat. Theor. Appl. Genet. 100: 602-606 (2000).

36.   The structure of Aegilops tauschii genepool and the evolution of hexaploid wheat. Theor. Appl. Genet. 97: 654-670 (1998).

37.   Seed-storage-protein loci in RFLP maps of diploid, tetraploid, and hexaploid wheat. Theor. Appl. Genet. 95: 1169-1180 (1997).

38.   Engineering of interstitial foreign chromosome segments containing the K+/Na+ selectivity gene Kna1 by sequential homoeologous recombination in durum wheat. Theor. Appl. Genet. 93: 1180-1184 (1996).

39.   : Mapping of the K+/Na+ discrimination locus Kna1 in wheat. Theor. Appl. Genet. 92: 448-454 (1996).

40.   Linkage relationships among stress-induced genes in wheat. Theor. Appl. Genet. 91: 795-801 (1995).

41.   Nelson, W. M, J. Dvorak, M.-C. Luo, J. Messing, R. A. Wing and C. Soderlund. Efficacy of clone fingerprinting methodologies. Genomics 89:160-165 (2007).

42.   Molecular mapping of an aluminum tolerance locus on chromosome 4D of Chinese Spring wheat. Euphytica 91: 31-35 (1996).

43.   Crossability percentages of wheat landraces from Shaanxi and Henan provinces, China with rye. Euphytica 67: 1-8 (1993).

44.   Crossability percentages of bread wheat collection from Tibet, China with rye. Euphytica 70: 127-129 (1993).

45.   The crossability percentages of bread wheat landraces from Sichuan, China with rye. Euphytica 61: 1-7 (1992).